Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
CA7971 | CA33593 | U.S. | 2002 | HIV1 | B | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | AZT+3TC+NFV | 74 |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
M46ML | L19Q, A71T, V77I |
>CA33593| codons 1-99 PQITLWQRPLVTIKIGGQQKEALLDTGADDTVLEEMNLPGRWKPKLIGGIGGFIKVRQYD QILIEICGHKTIGTVLIGPTPVNIIGRNLLTQIGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
M184V | A62AV | E6EG, R83K, K103R, D123E, S162C, D177E, T200A, P243S, V245E, A272P, K281R, T286A, V292I, I293V, M357T, R358RK, T369V, A376T, T386S, E399D, A400T, Y405H, A446S, D460N, R461K, S468T, H483Y, Q509I, Q520R, Q524E, A554N |
>CA34609| codons 1-560 PISPIGTVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPV FVIKKKDSTKWRKLVDFRELNKKTQDFWEVQLGIPHPAGLKKRKSVTVLDVGDAYFSVPL DKEFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILEPFRKQNPEIVI YQYVDDLYVGSDLEIGQHRAKIEELRQHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQSIELPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCRLLRGAKALTEIVPLTEEAE LELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARTKGA HTNDVKQLVEAVQKITTESIVIWGKSPKFKLPIQKETWDTWWTEHWQATWIPEWEFVNTP PLVKLWYQLEKEPIVGAETFYVDGASNRETKLGKAGYVTNKGRQKVVTLTDTTNQKTELQ AIYLALQDSGLEVNIVTDSQYALGIIQAIPDKSESELVSRIIEELIKKEKVYLAWVPAHK GIGGNEQVDKLVSNGIRKVL |
References
Author | Title | Citation |
Rhee, SY | HIV-1 protease and reverse transcriptase mutations: Correlations with antiretroviral therapy in subtype B isolates and implications for drug-resistance surveillance. | J Infect Dis, 2005 |