Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
CA14336 | CA33539 | U.S. | 2002 | HIV1 | B | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | 3TC+D4T+NFV | 160 |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
D30N | T74TP, N88D | I13V, K14R, K20KT, N37S, R41K, L63P, A71AITV, V77I |
>CA33539| codons 1-99 PQITLWQRPLVTVRIGGQLTEALLDTGADNTVLEEMSLPGKWKPKMIGGIGGFIKVRQYD QIPIEICGHKVIGPVLIGPTPVNIIGRDLLTQIGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
M184V | V35VI, R83K, K101KQ, D123E, I135T, T200A, F214L, V245VE, T286A, V292I, I293V, E297A, M357T, K366R, A400S, V435E, D460N, R461K, S468T, Q509H, K550G | L289V |
>CA34552| codons 1-560 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALIEICTEMEKEGKISKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKKTQDFWEVQLGIPHPAGLQKKKSVTVLDVGDAYFSVPL DKEFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVI YQYVDDLYVGSDLEIGQHRAKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWT VQPIELPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGAKAVTEIVPLTAEAE LELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARTRGA HTNDVRQLTEAVQKIATESIVIWGKTPKFKLPIQKETWESWWTEYWQATWIPEWEFVNTP PLVKLWYQLEKEPIEGAETFYVDGAANRETKLGKAGYVTNKGRQKVVTLTDTTNQKTELQ AIHLALQDSGLEVNIVTDSQYALGIIQAHPDKSESELVSQIIEQLIKKEKVYLAWVPAHK GIGGNEQVDGLVSAGIRKVL |
References
Author | Title | Citation |
Rhee, SY | HIV-1 protease and reverse transcriptase mutations: Correlations with antiretroviral therapy in subtype B isolates and implications for drug-resistance surveillance. | J Infect Dis, 2005 |
Rhee, SY | Predictive value of HIV-1 genotypic resistance test interpretation algorithms. | J Infect Dis, 2009 |