Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
CA1149 | CA3352 | U.S. | 1998 | HIV1 | B | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | AZT | NA |
2 | AZT+DDI | NA |
3 | 3TC+AZT+SQV | 74 |
4 | 3TC+D4T+NFV | 39 |
5 | DDI+NVP+IDV | NA |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
M41L, T215Y | K103N, Y181C | K122E, S162C, R211RK, V245E, K277R, Q278QH, T286A, T290TS, E291D, E297K |
>CA3352| codons 1-298 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTELEKEGKISKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKNKSVTVLDVGDAYFSVPL DEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILEPFRKQNPDIVI CQYMDDLYVGSDLEIGQHRTKIEELRQHLLKWGFYTPDKKHQKEPPFLWMGYELHPDKWT VQPIELPEKDSWTVNDIQKLVGKLNWASQIYAGIKVRHLCKLLRGAKALSDVIPLTKE |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
L90M | G73GA | L10I, L63P, T74S, V77I |
>CA3353| codons 1-99 PQITLWQRPIVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGIGGFIKVRQYD QIPIEICGHKAIASVLIGPTPVNIIGRNLMTQIGCTLNF |
References
Author | Title | Citation |
Rhee, SY | HIV-1 protease and reverse transcriptase mutations: Correlations with antiretroviral therapy in subtype B isolates and implications for drug-resistance surveillance. | J Infect Dis, 2005 |