<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Isolate Data

Patient Isolate Region Year Species Subtype Source Clone Method
329 13.ZA.EC789 South Africa 2013 HIV1 C Plasma None

Treatment History
Order Regimen Weeks
1 3TC+ABC+EFV NA

RT Sequence
NRTIMajorDRMs NRTIMinorDRMs NNRTIMajorDRMs NNRTIMinorDRMs Polys UnusualMuts
L74V, Y115F, M184V   V106M V179D, F227L V35M, T39E, S48T, K103R, K122E, D123G, K173T, T200A, Q207K, R211I, V245E  
>13.ZA.EC789| codons 1-262
PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALMEICEEMEKEGKITKIGPENPYNTPV
FAIKKKDSTKWRKVVDFRELNKRTQDFWEVQLGIPHPAGLKKRKSMTVLDVGDAFFSVPL
DEGFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRTQNPDIDI
YQYVDDLYVGSDLEIGQHRAKIEELRKHLLIWGFTTPDKKHQKEPPLLWMGYELHPDKWT
VQPIELPEKDSWTVNDIQKLVG

Protease Sequence
PIMajorDRMs PIMinorDRMs Polys UnusualMuts
    L10I, T12S, I15V, L19I, E35D, M36I, N37E, R41K, L63V, H69K, T74S, L89M, I93L  
>13.ZA.EC789| codons 1-99
PQITLWQRPIVSIKVGGQIKEALLDTGADDTVLEDIELPGKWKPKMIGGIGGFIKVRQYD
QIVIEICGKKAIGSVLVGPTPVNIIGRNMLTQLGCTLNF

References
Author Title Citation
Neogi, U Mutational Heterogeneity in p6 Gag Late Assembly (L) Domains in HIV-1 Subtype C Viruses from South Africa. ARHR, 2016