<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Isolate Data

Patient Isolate Region Year Species Subtype Source Clone Method
4237 13.ZA.GT2788 South Africa 2013 HIV1 C Plasma None

Treatment History
Order Regimen Weeks
1 3TC+D4T+EFV NA

RT Sequence
NRTIMajorDRMs NRTIMinorDRMs NNRTIMajorDRMs NNRTIMinorDRMs Polys UnusualMuts
M184V K219R K103N, V106M F227L K20R, V21I, V35T, T39E, W88S, K122E, D123S, T165I, K173T, Q174K, D177N, I178L, T200A, Q207E, F214L, H221Y, V245S  
>13.ZA.GT2788| codons 1-259
PISPIETVPVKLKPGMDGPRIKQWPLTEEKIKALTEICEEMEKEGKISKIGPENPYNTPV
FAIKKKDSTKWRKLVDFRELNKRTQDFSEVQLGIPHPAGLKKNKSMTVLDVGDAYFSVPL
DESFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMIKILEPFRTKNPNLVI
YQYVDDLYVGSDLEIGQHRAKIEELREHLLRWGLTTPDRKYQKEPPLLWMGYELHPDKWT
VQPISLPEKDSWTVNDIQK

Protease Sequence
PIMajorDRMs PIMinorDRMs Polys UnusualMuts
    T12S, I15V, L19I, M36I, N37S, L63V, H69K, T74S, L89M, I93L L23LF
>13.ZA.GT2788| codons 1-99
PQITLWQRPLVSIKVGGQIKEAFLDTGADDTVLEEISLPGRWKPKMIGGIGGFIKVRQYD
QIVIEICGKKAIGSVLVGPTPVNIIGRNMLTQLGCTLNF

References
Author Title Citation
Neogi, U Mutational Heterogeneity in p6 Gag Late Assembly (L) Domains in HIV-1 Subtype C Viruses from South Africa. ARHR, 2016