Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| 00BW3886 | 00BW3886 | Botswana | 2000 | HIV1 | C | PBMC | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| T12S, I15V, L19I, M36L, N37S, R41K, L63P, H69K, L89M, I93L | T26I |
| >00BW3886| codons 1-99 PQITLWQRPLVSIKVGGQIKEALLDIGADDTVLEELSLPGKWKPKMIGGIGGFIKVRQYD QIPIEICGKKAIGTVLVGPTPVNIIGRNMLTQLGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| V35T, E36A, T39E, S48T, K122E, D123S, I135T, S162C, K173A, D177E, T200A, Q207E, R211K, V245Q, A272T, K277R, T286A, E291D, V292I, I293V, E312G, R356K, G359T, T377M, K390R, A400I, E404D, W426R, V435A, A437V, L452V, V467I, S468T, D471E, T477A, H483Q, L491S, V493A, S519N, K530G, A534S, A554K |
| >00BW3886| codons 1-560 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTAICEEMEKEGKITKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DESFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILEPFRAQNPEIVI YQYMDDLYVGSDLEIGQHRAKIEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPEKDSWTVNDIQKLVGKLNWASQIYTGIKVRQLCKLLRGAKALTDIVPLTEEAE LELAENREILKGPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYAKMRTA HTNDVKQLTEAVQKIAMESIVIWGKTPKFRLPIQKETWEIWWTDYWQATWIPEWEFVNTP PLVKLRYQLEKEPIAGVETFYVDGAANRETKVGKAGYVTDRGRQKVITLTETTNQKAELQ AIQLALQDSGSEANIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKEGVYLSWVPAHK GIGGNEQVDKLVSKGIRKVL |
References
| Author | Title | Citation |
| Novitsky, V | Human immunodeficiency virus type 1 subtype C molecular phylogeny: consensus sequence for an AIDS vaccine design? | J Virol, 2002 |