Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
1-1-001 | 1-1-001 | Nigeria | 2008 | HIV1 | G | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | None | NA |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
K20I, E35Q, M36I, N37D, R41K, K43KR, R57K, I62IV, L63S, C67E, H69K, V82I, L89M |
>1-1-001| codons 15-99 IGGQLIEALLDTGADDTVLEQIDLPGKWRPKMIGGIGGFIKVKQYDQVSIEIEGKKAIGT VLVGPTPINIIGRNMLTQIGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
V35T, T39TIM, V60I, K104KR, K173T, Q174K, G196GE, T200A, Q207DGNS, R211RK, V245Q, E248N |
>1-1-001| codons 1-249 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICMEMEKEGKISKIGPENPYNTPI FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKRSVTVLDVGDAYFSVPL DKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRTKNPDIVI YQYMDDLYVGSDLEIEQHRAKIEELRSHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPNK |
References
Author | Title | Citation |
Diallo, K | Viral genetic diversity and polymorphisms in a cohort of HIV-1-infected patients eligible for initiation of antiretroviral therapy in Abuja, Nigeria. | AIDS Res Hum Retroviruses, 2015 |