Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
1-1-113 | 1-1-113 | Nigeria | 2008 | HIV1 | CRF02_AG | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | None | NA |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
G16E, K20I, E35G, M36I, R41K, H69K, K70E, L89M |
>1-1-113| codons 15-99 IEGQLIEALLDTGADDTVLEGINLPGKWKPKMIGGIGGFIKVRQYDQILIEICGKEAIGT VLVGPTPVNIIGRNMLTQIGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
K11T, V35T, D86E, K102Q, D123N, S162A, K173T, Q174K, D177E, Q207A, R211K, F214L, V245Q, E248D |
>1-1-113| codons 1-249 PISPIETVPVTLKPGMDGPKVKQWPLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQEFWEVQLGIPHPAGLKQKKSVTVLDVGDAYFSVPL DKNFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQASMTKILEPFRTKNPEIVI YQYMDDLYVGSDLEIGQHRTKIEELRAHLLKWGLTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPDK |
References
Author | Title | Citation |
Diallo, K | Viral genetic diversity and polymorphisms in a cohort of HIV-1-infected patients eligible for initiation of antiretroviral therapy in Abuja, Nigeria. | AIDS Res Hum Retroviruses, 2015 |