Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
09AOHDP15 | 09AOHDP15 | Angola | 2009 | HIV1 | D | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | None | NA |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
L10I, L19V, E35D, M36I, N37D, R41K, Q61N, I62IV, L63S, E65D, I72T, N83NS |
>09AOHDP15| codons 1-99 PQITLWQRPIVTIKIGGQVKEALLDTGADDTVLEDIDLPGKWKPKMIGGIGGFIKVRQYD NVSIDICGHKATGTVLVGPTPVSIIGRNLLTQIGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
K11Q, V35T, T39A, E40D, K49R, V60I, D121C, K122E, I135V, I142T, T165I, E169D, D177E, I178L, G196E, T200M, E204K, Q207E, R211K, F214L, V245T, P247A, T286A, I293V, E297K |
>09AOHDP15| codons 1-301 PISPIETVPVQLKPGMDGPKVKQWPLTEEKIKALTEICADMEKEGKISRIGPENPYNTPI FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL CEDFRKYTAFTIPSVNNETPGTRYQYNVLPQGWKGSPAIFQSSMIKILDPFRKQNPELVI YQYMDDLYVGSDLEIEQHRMKIEKLREHLLKWGLTTPDKKHQKEPPFLWMGYELHPDKWT VQPITLAEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGAKALTEVVPLTKEAE L |
References
Author | Title | Citation |
Bartolo, I | HIV-1 diversity, transmission dynamics and primary drug resistance in Angola. | PLoS ONE, 2014 |