<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Isolate Data

Patient Isolate Region Year Species Subtype Source Clone Method
09AOHDP98 09AOHDP98 Angola 2009 HIV1 A Plasma None

Treatment History
Order Regimen Weeks
1 None NA

Protease Sequence
PIMajorDRMs PIMinorDRMs Polys UnusualMuts
    L10I, I13V, L19I, M36I, R41K, L63T, H69Q, L89M  
>09AOHDP98| codons 1-99
PQITLWQRPIVTVKIGGQIKEALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIKVRQYD
QITIEICGQKAIGTVLVGPTPVNIIGRNMLTQIGCTLNF

RT Sequence
NRTIMajorDRMs NRTIMinorDRMs NNRTIMajorDRMs NNRTIMinorDRMs Polys UnusualMuts
        T27TS, V35T, T39KN, E40D, K122E, D123NS, I135IT, A158AS, S162SDGN, E169EG, K173AT, Q174DEKN, D177E, I195L, G196S, T200A, Q207A, R211S, V245K, D250E, L283I, T286A, E291D, I293V, P294T, L295M  
>09AOHDP98| codons 1-301
PISPIETVPVKLKPGMDGPKVKQWPLSEEKIKALTEICNDMEKEGKISKIGPENPYNTPV
FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL
DESFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPSIFQNSMTKILGPFRTNNPEIVI
YQYMDDLYVGSDLELSQHRAKIEELRAHLLSWGFTTPDKKHQKEPPFLWMGYELHPDKWT
VQPIKLPEKESWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLIRGAKALTDVVTMTEEAE
L

References
Author Title Citation
Bartolo, I HIV-1 diversity, transmission dynamics and primary drug resistance in Angola. PLoS ONE, 2014