Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
CHU50 | CHU50 | DRC | 1997 | HIV1 | CRF45_cpx | PBMC | None |
Treatment History
Order | Regimen | Weeks |
1 | None | NA |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
L10V, I13V, K14R, I15V, G16E, E35D, M36I, N37D, R41K, L63V, H69K, L89M |
>CHU50| codons 1-99 PQITLWQRPVVTVRVEGQLKEALLDTGADDTVLEDIDLPGKWKPKMIGGIGGFIKVRQYD QIVIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
K20R, V35T, V60I, T69A, D121H, K122E, D123E, K173I, Q174K, Q207K, R211A, V245Q, E248D, D250E, A272P, K277R, T286A, E291D, V292I, I293V, E297A, D324E, E328D, G333E, Q334G, P345Q, F346Y, M357T, G359S, V365I, K366R, T377Q, K390R, A400T |
>CHU50| codons 1-427 PISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPI FAIKKKDSAKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL HEEFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRIKNPDIVI YQYMDDLYVGSDLEIGQHRTKIEELRKHLLAWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPDKESWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGAKALTDIVPLTAEAE LELAENREILKEPVHGVYYDPSKELIADIQKQEGGQWTYQIYQEQYKNLKTGKYARTRSA HTNDIRQLTEAVQKIAQESIVIWGKTPKFRLPIQKETWETWWTEYWQATWIPEWEFVNTP PLVKLWY |
References
Author | Title | Citation |
Niama, FR | HIV-1 subtypes and recombinants in the Republic of Congo. | Infect Genet Evol, 2006 |