Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
GP09_0092 | GP09_0092 | South Africa | 2007 | HIV1 | C | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | None | NA |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
I13V, I15V, L19I, M36I, R41K, L63Q, I64L, H69K, L89M, I93L |
>GP09_0092| codons 1-99 PQITLWQRPLVTVKVGGQIKEALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIKVRQYD QIQLEICGKKAIGTVLVGPTPVNIIGRNMLTQLGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
K20R, V35T, E36A, T39E, S48T, V60VI, K104KR, K122E, D123N, I135R, S162C, K173KT, E194A, G196GE, T200A, Q207E, V245Q, E248N, A272P, K277R | L149LF |
>GP09_0092| codons 1-285 PISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALTAICEEMEKEGKITKIGPENPYNTPI FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKRSVTVLDVGDAYFSVPL DENFRKYTAFTIPSRNNETPGIRYQYNVFPQGWKGSPAIFQCSMTKILEPFRTQNPDIVI YQYMDDLYVGSDLAIEQHRAKIEELREHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPNKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRG |
References
Author | Title | Citation |
Hunt, GM | Surveillance of transmitted HIV-1 drug resistance in Gauteng and KwaZulu-Natal Provinces, South Africa, 2005-2009. | Clin Infect Dis, 2012 |