Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
GP07_219767 | GP07_219767 | South Africa | 2008 | HIV1 | C | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | None | NA |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
L10V, T12S, I15V, L19I, K20R, E35D, M36I, R41K, D60E, L63V, H69K, I85V, L89M, I93L |
>GP07_219767| codons 1-99 PQITLWQRPVVSIKVGGQIREALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVRQYE QIVIEICGKKAIGTVLVGPTPVNIVGRNMLTQLGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
V35T, E36EG, T39EK, S48T, E53D, K122A, S162SC, T165TI, K173A, Q174NS, D177E, T200A, Q207E, R211K, V245Q, A272P, K277R, E291D, I293V | I178IT |
>GP07_219767| codons 1-298 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTGICKEMEKEGKITKIGPDNPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DADFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQCSMIKILEPFRASNPETVI YQYMDDLYVGSDLEIGQHRAKIEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTDVVPLTEE |
References
Author | Title | Citation |
Hunt, GM | Surveillance of transmitted HIV-1 drug resistance in Gauteng and KwaZulu-Natal Provinces, South Africa, 2005-2009. | Clin Infect Dis, 2012 |