Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
ETH-G-5545 | ETH-G-5545 | Ethiopia | 2009 | HIV1 | C | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | None | NA |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
T12P, I13V, I15V, L19I, M36I, R41K, L63H, H69K, L89M, I93L |
>ETH-G-5545| codons 1-99 PQITLWQRPLVPVKVGGQIKEALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIKVRQYD QIHIEICGKKAIGTVLVGPTPVNIIGRNMLTQLGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
V8I, E28K, K32E, V35T, E36A, T39E, S48T, K122E, D123E, I135T, I142V, S162C, K173E, D177E, I178L, T200A, Q207E, V245Q, D250E, A272P, K277R, V292I, I293V, V317T, P321Q |
>ETH-G-5545| codons 1-328 PISPIETIPVKLKPGMDGPKVKQWPLTKEKIEALTAICEEMEKEGKITKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DEEFRKYTAFTIPSTNNETPGVRYQYNVLPQGWKGSPAIFQCSMTKILEPFREQNPELVI YQYMDDLYVGSDLEIGQHRAKIEELREHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPEKESWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEIVPLTEEAE LELAENREILKEPVHGTYYDQSKDLIAE |
References
Author | Title | Citation |
Mulu, A | Clade homogeneity and Pol gene polymorphisms in chronically HIV-1 infected antiretroviral treatment naive patients after the roll out of ART in Ethiopia. | BMC Infect Dis, 2015 |