Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
ETH-G-5622 | ETH-G-5622 | Ethiopia | 2009 | HIV1 | C | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | None | NA |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
T12S, I15V, L19I, E35D, M36I, R41K, L63Q, H69K, L89M, I93L |
>ETH-G-5622| codons 1-99 PQITLWQRPLVSIKVGGQIKEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVRQYD QIQIEICGKKAIGTVLVGPTPVNIIGRNMLTQLGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
V35T, E36T, T39E, K122E, D123S, I135R, K173A, Q174K, D177E, T200A, I202V, Q207E, F214L, V245Q, E248D, A272P, K277R, T286A, E291D, V292I, I293V, P294T |
>ETH-G-5622| codons 1-330 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTTICEEMEKEGKISKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DESFRKYTAFTIPSRNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRAKNPEIVI YQYMDDLYVGSDLEIGQHRAKVEELREHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPDKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGAKALTDIVTLTEEAE LELAENREILKEPVHGVYYDPSKDLIAEIQ |
References
Author | Title | Citation |
Mulu, A | Clade homogeneity and Pol gene polymorphisms in chronically HIV-1 infected antiretroviral treatment naive patients after the roll out of ART in Ethiopia. | BMC Infect Dis, 2015 |