<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Isolate Data

Patient Isolate Region Year Species Subtype Source Clone Method

Treatment History
Order Regimen Weeks
1 None NA

Integrase Sequence
INIMajorDRMs INIMinorDRMs Polys UnusualMuts
  L74M D6E, K14R, S17N, V31I, E35Q, S39N, I60M, I72V, T112I, I113V, T124A, T125A, V126F, G134S, K136Q, D167E, V201I, I203M N27NI, S283G
>SYZ40INT| codons 1-288
FLDGIEKAQEEHERYHNNWRAMASDFILPPIVAKQIVANCDKCQLKGEAMHGQVDCSPGM
WQLDCTHLEGKVIMVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKIVHTDNGSN
FTSAAFKAACWWASIQQEFGIPYNPQSQGVVESMNKELKKIIGQVREQAEHLKTAVQMAV
FIHNFKRKGGIGGYSAGERIIDMIATDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAK
LLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVAGRQDED

Protease Sequence
PIMajorDRMs PIMinorDRMs Polys UnusualMuts
    I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M  
>SYZ40PRRT| codons 1-99
PQITLWQRPLVTVKIGGQLREALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVKQYD
QILIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNF

RT Sequence
NRTIMajorDRMs NRTIMinorDRMs NNRTIMajorDRMs NNRTIMinorDRMs Polys UnusualMuts
        E6D, K11R, V35T, V60I, D121Y, K122E, D123DA, I135T, E138A, T139A, D177E, I178L, V179I, T200I, Q207A, R211K, F214L  
>SYZ40PRRT| codons 1-240
PISPIDTVPVRLKPGMDGPKVKQWPLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPI
FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL
YEAFRKYTAFTIPSTNNAAPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPELII
YQYMDDLYVGSDLEIGQHRIKIEELRAHLLKWGLTTPDKKHQKEPPFLWMGYELHPDKWT

References
Author Title Citation
Jahanbakhsh, F Prevalence of transmitted HIV drug resistance in Iran between 2010 and 2011. PLoS ONE, 2012