<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Isolate Data

Patient Isolate Region Year Species Subtype Source Clone Method

Treatment History
Order Regimen Weeks
1 None NA

Integrase Sequence
INIMajorDRMs INIMinorDRMs Polys UnusualMuts
  E138ED D6E, K14KR, S17N, E35Q, S39N, I60M, I72V, I84IM, T112V, I113V, T124A, T125A, V126F, I135IV, K136Q, I141IV, D167EK, V201I, S230N S283G
>THR49INT| codons 1-288
FLDGIEKAQEEHERYHNNWRAMASDFNLPPVVAKQIVANCDKCQLKGEAMHGQVDCSPGM
WQLDCTHLEGKVILVAVHVASGYMEAEVIPAETGQETAYFLLKLAGRWPVKVVHTDNGSN
FTSAAFKAACWWAGVQQDFGVPYNPQSQGVVESMNKELKKIIGQVRKQAEHLKTAVQMAV
FIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQITKIQNFRVYYRDNRDPLWKGPAK
LLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVAGRQDED

Protease Sequence
PIMajorDRMs PIMinorDRMs Polys UnusualMuts
    I13V, L19Q, K20R, E35D, M36I, R41K, R57K, H69K, L89M D29DEV
>THR49PRRT| codons 1-99
PQITLWQRPLVTVKIGGQQREALLDTGAVDTVLEDINLPGKWKPKMIGGIGGFIKVKQYD
QILIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNF

RT Sequence
NRTIMajorDRMs NRTIMinorDRMs NNRTIMajorDRMs NNRTIMinorDRMs Polys UnusualMuts
        E6D, V8I, K11R, V35T, V60I, K122E, I135R, A158AS, S162SC, Q174N, D177E, V179I, T200I, Q207A, R211K  
>THR49PRRT| codons 1-240
PISPIDTIPVRLKPGMDGPKVKQWPLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPI
FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL
DEDFRKYTAFTIPSRNNETPGIRYQYNVLPQGWKGSPSIFQCSMTKILEPFRKNNPEIII
YQYMDDLYVGSDLEIGQHRIKIEELRAHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT

References
Author Title Citation
Jahanbakhsh, F Prevalence of transmitted HIV drug resistance in Iran between 2010 and 2011. PLoS ONE, 2012