<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Isolate Data

Patient Isolate Region Year Species Subtype Source Clone Method

Treatment History
Order Regimen Weeks
1 None NA

Protease Sequence
PIMajorDRMs PIMinorDRMs Polys UnusualMuts
    T12P, I13V, L19Q, K20R, E35D, M36I, R41K, I62V, L63V, H69K, L89M  
>SYZ36PRRT| codons 1-99
PQITLWQRPLVPVKIGGQQREALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVRQYD
QVVIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNF

RT Sequence
NRTIMajorDRMs NRTIMinorDRMs NNRTIMajorDRMs NNRTIMinorDRMs Polys UnusualMuts
        E6D, K11KR, V35T, V60I, D121H, K122EV, D123DGNS, I135T, K173EQ, D177EG, I178IL, V179VI, T200V, E204EK, Q207A, R211K  
>SYZ36PRRT| codons 1-240
PISPIDTVPVRLKPGMDGPKVKQWPLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPI
FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL
HVSFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRQQNPGLII
YQYMDDLYVGSDLEIGQHRVKIEKLRAHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT

Integrase Sequence
INIMajorDRMs INIMinorDRMs Polys UnusualMuts
    D6DE, K14R, S17SN, V31VI, V32I, S39N, I60M, I72V, I113V, S119P, T125A, V126F, G134S, I135V, K136Q, I141IF, D167EK, K173KR, V201I, K211R, D232DN, V249VI S283G
>SYZ36INT| codons 1-288
FLDGIEKAQEEHERYHNNWRAMASDFNLPPIIAKEIVANCDKCQLKGEAMHGQVDCSPGM
WQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTVHTDNGPN
FTSTAFKAACWWASVQQEFGFPYNPQSQGVVESMNKELKKIIGQVRKQAEHLRTAVQMAV
FIHNFKRKGGIGGYSAGERIIDIIATDIQTRELQKQITKIQNFRVYYRDSRNPLWKGPAK
LLWKGEGAIVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVAGRQDED

References
Author Title Citation
Jahanbakhsh, F Prevalence of transmitted HIV drug resistance in Iran between 2010 and 2011. PLoS ONE, 2012