<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Isolate Data

Patient Isolate Region Year Species Subtype Source Clone Method

Treatment History
Order Regimen Weeks
1 None NA

Integrase Sequence
INIMajorDRMs INIMinorDRMs Polys UnusualMuts
    G4E, V31I, V32I, E35K, S39N, D41N, L45I, D55N, I60M, E69K, G70E, I72V, T112V, I113V, T124A, T125A, V126F, G134N, K136Q, F139T, M154I, R166K, D167E, V201I, I203M, L242LF H171HP, S283G
>THR14INT| codons 1-288
FLDEIDKAQEEHEKYHSNWRAMASDFNLPPIIAKKIVANCNKCQIKGEAMHGQVNCSPGM
WQLDCTHLKEKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKVVHTDNGSN
FTSAAFKAACWWANIQQETGIPYNPQSQGVVESINKELKKIIGQVKEQAEPLKTAVQMAV
FIHNFKRKGGIGGYSAGERIIDMIATDIQTKELQKQITKIQNFRVYYRDSRDPLWKGPAK
LFWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVAGRQDED

Protease Sequence
PIMajorDRMs PIMinorDRMs Polys UnusualMuts
  V11I T12S, I13V, K14T, L19Q, K20R, L33V, E35D, M36I, R41K, R57K, H69K, L89M, T91A  
>THR14PRRT| codons 1-99
PQITLWQRPLISVTIGGQQREALLDTGADDTVVEDINLPGKWKPKMIGGIGGFIKVKQYD
QILIEICGKKAIGTVLVGPTPVNIIGRNMLAQIGCTLNF

RT Sequence
NRTIMajorDRMs NRTIMinorDRMs NNRTIMajorDRMs NNRTIMinorDRMs Polys UnusualMuts
        E6D, V8I, V35T, K43R, K49R, V60I, D121H, K122E, I135K, K166R, Q174H, D177E, V179I, T200I, Q207A, R211K  
>THR14PRRT| codons 1-240
PISPIDTIPVKLKPGMDGPKVKQWPLTEEKIKALTEICTEMEREGKISRIGPENPYNTPI
FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL
HEDFRKYTAFTIPSKNNETPGIRYQYNVLPQGWKGSPAIFQSSMTRILEPFRKHNPEIII
YQYMDDLYVGSDLEIGQHRIKIEELRAHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT

References
Author Title Citation
Jahanbakhsh, F Prevalence of transmitted HIV drug resistance in Iran between 2010 and 2011. PLoS ONE, 2012