<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Isolate Data

Patient Isolate Region Year Species Subtype Source Clone Method

Treatment History
Order Regimen Weeks
1 None NA

Integrase Sequence
INIMajorDRMs INIMinorDRMs Polys UnusualMuts
    D6E, K14R, A21AT, M22MI, A23V, E35EQ, S39N, M50MI, I60M, I72IV, T112V, I113V, T124S, T125A, V126F, G134S, K136Q, D167EK, V201I, I203M, I208IM, D232DN, L234LH S283G
>KSH29INT| codons 1-288
FLDGIEKAQEEHERYHSNWRTIVSDFNLPPVVAKQIVANCDKCQLKGEAIHGQVDCSPGM
WQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKVVHTDNGSN
FTSSAFKAACWWASIQQEFGIPYNPQSQGVVESMNKELKKIIGQVRKQAEHLKTAVQMAV
FIHNFKRKGGIGGYSAGERIIDMIATDMQTKELQKQITKIQNFRVYYRDSRNPHWKGPAK
LLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVAGRQDED

Protease Sequence
PIMajorDRMs PIMinorDRMs Polys UnusualMuts
    I13V, L19Q, E35D, M36I, R41K, R57K, I66IV, H69K, L89M  
>KSH29PRRT| codons 1-99
PQITLWQRPLVTVKIGGQQKEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVKQYD
QILIEVCGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNF

RT Sequence
NRTIMajorDRMs NRTIMinorDRMs NNRTIMajorDRMs NNRTIMinorDRMs Polys UnusualMuts
        E6D, K11KNRS, V35T, V60I, D121H, K122E, I135T, K166R, D177E, T200TI, Q207A, R211K  
>KSH29PRRT| codons 1-240
PISPIDTVPVSLKPGMDGPKVKQWPLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPI
FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL
HEDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTRILEPFRKQNPEIVI
YQYMDDLYVGSDLEIGQHRIKIEELRAHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT

References
Author Title Citation
Jahanbakhsh, F Prevalence of transmitted HIV drug resistance in Iran between 2010 and 2011. PLoS ONE, 2012