<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Isolate Data

Patient Isolate Region Year Species Subtype Source Clone Method

Treatment History
Order Regimen Weeks
1 Unknown NA

Integrase Sequence
INIMajorDRMs INIMinorDRMs Polys UnusualMuts
    D3E, E11D, R20K, V31I, I72V, L74I, E85Q, K111I, T112V, I113V, S119P, T124S, T125A, V126I, G134D, K136Q, D167K, H183L, V201I, L234I, S255N D64Y
>CY213| codons 1-288
FLEGIDKAQEDHEKYHSNWKAMASDFNLPPIVAKEIVASCDKCQLKGEAMHGQVDCSPGI
WQLYCTHLEGKVIIVAVHVASGYIQAEVIPAETGQETAYFLLKLAGRWPVIVVHTDNGPN
FTSSAIKAACWWADIQQEFGIPYNPQSQGVVESMNKELKKIIGQVRKQAEHLKTAVQMAV
FILNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQITKIQNFRVYYRDSRDPIWKGPAK
LLWKGEGAVVIQDNNDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED

Protease Sequence
PIMajorDRMs PIMinorDRMs Polys UnusualMuts
    I13IV, K14R, E35D, M36I, R41K, H69K, V77I, L89M  
>CY213| codons 1-99
PQITLWQRPLVTVRIGGQLKEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVRQYD
QILIEICGKKAIGTVLIGPTPVNIIGRNMLTQIGCTLNF

RT Sequence
NRTIMajorDRMs NRTIMinorDRMs NNRTIMajorDRMs NNRTIMinorDRMs Polys UnusualMuts
  A62V     K11T, V35I, E36D, T39E, K82KR, K122E, D123NS, I135T, A158AS, K173L, Q174K, D177E, T200TA, Q207AT, R211RS, V245M, E248D, A272P, T286A, E291D, V292I, I293V, P294T, I326V, R356K, M357K, R358G, G359S, E370A, A371V, I375V, V381I, K390R, T403M, L452M, S468P, D471E, Q480H, L491S, K512S, L517V, S519N, Q520K, Q524K, K527E, K530R, A534S, A554N, K558R  
>CY213| codons 1-560
PISPIETVPVTLKPGMDGPKVKQWPLTEEKIKALIDICEEMEKEGKISKIGPENPYNTPV
FVIKKKDSTKWRKLVDFRELNRRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL
DESFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPSIFQSSMTKILEPFRLKNPEIVI
YQYMDDLYVGSDLEIGQHRAKIEELRTHLLSWGFTTPDKKHQKEPPFLWMGYELHPDKWT
VQPIMLPDKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGAKALTDIVTLTEEAE
LELAENREILKEPVHGVYYDPSKDLVAEIQKQGQGQWTYQIYQEPFKNLKTGKYAKKGSA
HTNDVKQLTAVVQKVATESIIIWGKTPKFRLPIQKETWEAWWMEYWQATWIPEWEFVNTP
PLVKLWYQLEKEPIVGAETFYVDGAANRETKMGKAGYVTDRGRQKVVPLTETTNQKTELH
AIHLALQDSGSEVNIVTDSQYALGIIQAQPDSSESEVVNKIIEKLIEKERVYLSWVPAHK
GIGGNEQVDKLVSNGIRRVL

References
Author Title Citation
Kousiappa, I Molecular characterization of HIV type 1 strains from newly diagnosed patients in Cyprus (2007-2009) recovers multiple clades including unique recombinant strains and lack of transmitted drug resistance. ARHR, 2011