<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Isolate Data

Patient Isolate Region Year Species Subtype Source Clone Method

Treatment History
Order Regimen Weeks
1 None NA

RT Sequence
NRTIMajorDRMs NRTIMinorDRMs NNRTIMajorDRMs NNRTIMinorDRMs Polys UnusualMuts
        E6D, P9S, V35T, K122E, D123S, S162C, K173R, Q174K, D177E, Q207A, L210M, R211N, V245E, T286A, E291D, V292I, I293V, E312T, I329V, G335D, M357K, G359S, K366R, A371V, K390R, A400T, T403M, E432D, N447S, R448K, L452LS, D471E, Q480H, L491S, K512R, L517V, S519N, Q524E, E529D, A534S, I556V, K558KR  
>10MYKJ067| codons 1-560
PISPIDTVSVKLKPGMDGPKVKQWPLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPV
FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL
DESFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILEPFRRKNPEIVI
YQYMDDLYVGSDLEIGQHRTKIEELRAHLMNWGFTTPDKKHQKEPPFLWMGYELHPDKWT
VQPIELPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGAKALTDIVPLTEEAE
LELAENREILKTPVHGVYYDPSKDLIAEVQKQGQDQWTYQIYQEPFKNLKTGKYARKRSA
HTNDVRQLTEVVQKIATESIVIWGKTPKFRLPIQKETWETWWMEYWQATWIPEWEFVNTP
PLVKLWYQLEKDPIVGAETFYVDGAASKETKSGKAGYVTDRGRQKVVSLTETTNQKTELH
AIHLALQDSGSEVNIVTDSQYALGIIQAQPDRSESEVVNQIIEELIKKDKVYLSWVPAHK
GIGGNEQVDKLVSAGVRRVL

Protease Sequence
PIMajorDRMs PIMinorDRMs Polys UnusualMuts
    K14E, G16E, E35D, M36I, N37D, I62V, E65K, H69K, L89M  
>10MYKJ067| codons 1-99
PQITLWQRPLVTIEIEGQLKEALLDTGADDTVLEDIDLPGRWKPKMIGGIGGFIKVRQYD
QVLIKICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNF

Integrase Sequence
INIMajorDRMs INIMinorDRMs Polys UnusualMuts
    K14R, A21T, A23V, S39N, L63V, I72V, L74I, E96D, T112V, T124A, T125A, G134N, K136Q, D167E, V201I, T206S, K211KR, L234I S283D
>10MYKJ067| codons 1-288
FLDGIDKAQEEHERYHSNWRTMVSDFNLPPVVAKEIVANCDKCQLKGEAMHGQVDCSPGI
WQVDCTHLEGKVIIVAVHVASGYIEAEVIPAETGQDTAYFLLKLAGRWPVKVIHTDNGSN
FTSAAVKAACWWANIQQEFGIPYNPQSQGVVESMNKELKKIIGQVREQAEHLKTAVQMAV
FIHNFKRKGGIGGYSAGERIIDIIASDIQTRELQKQITKIQNFRVYYRDSRDPIWKGPAK
LLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVADRQDED

References
Author Title Citation
Chow, WZ Genome sequences of a novel HIV-1 CRF53_01B identified in Malaysia J Virol, 2012