Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| PHAC_404 | PHAC_404 | Canada | 2003 | HIV1 | B | Plasma | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| T12S, L19I, L33V, M36L, N37S, I64V |
| >PHAC_404| codons 1-99 PQITLWQRPLVSIKIGGQIKEALLDTGADDTVVEELSLPGRWKPKMIGGIGGFIKVRQYD QILVEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| K104N, I135T, K166KR, T200TA, R211K, I274L, K277R, I293V, E297K |
| >PHAC_404| codons 1-314 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKNSVTVLDVGDAYFSVPL DKDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTRILEPFRKQNPDIVI YQYMDDLYVGSDLEIGQHRAKIEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIVLPEKDSWTVNDIQKLVGKLNWASQIYAGLKVRQLCKLLRGTKALTEVVPLTKEAE LELAENREILKEPV |
References
| Author | Title | Citation |
| Ragonnet-Cronin, M | Longitudinal phylogenetic surveillance identifies distinct patterns of cluster dynamics. | JAIDS, 2010 |
| Ragonnet-Cronin, M | Adaptive evolution of HIV at HLA epitopes is associated with ethnicity in Canada | PLoS ONE, 2012 |
| Ragonnet-Cronin, M | Genetic diversity as a marker for timing infection in HIV-infected patients: Evaluation of a 6-month window and comparison with BED. | J Infect Dis, 2012 |