Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| CA1157 | CA20401 | U.S. | 2000 | HIV1 | B | Plasma | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | AZT | 13 |
| 2 | AZT+ DDC | 247 |
| 3 | DDI | 30 |
| 4 | D4T | 8 |
| 5 | 3TC+ D4T | 8 |
| 6 | 3TC+ D4T+ SQV | 13 |
| 7 | 3TC+ D4T+ IDV | 107 |
| 8 | Unknown | NA |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| M46I, I84V, L90M | G73S | L10I, I13V, K14KR, Q18H, N37D, L63P, A71V, I72L, V77I, I85V |
| >CA20401| codons 1-99 PQITLWQRPIVTVRIGGHLKEALLDTGADDTVLEEMDLPGRWKPKIIGGIGGFIKVRQYD QIPIEICGHKVLSTVLIGPTPVNVVGRNLMTQIGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| M41L, D67N, T69D, M184V, L210W, T215Y | A62V | K20R, V35I, K43E, E44A, V118I, K122E, I135T, V179VI, R211K, L228H, A272P, K277R, E297K |
| >CA20008| codons 1-300 PISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALIEICTELEEAGKISKIGPENPYNTPV FVIKKKNSDKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSIPL DEDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIII YQYVDDLYVGSDLEIGQHRTKIEELRQHLWKWGFYTPDKKHQKEPPFHWMGYELHPDKWT VQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTKEAE |
References
| Author | Title | Citation |
| Rhee, SY | HIV-1 Protease and Reverse Transcriptase Mutations: Correlations with Antiretroviral Therapy in Subtype B Isolates and Implications for Drug-Resistance Surveillance. | J Infect Dis, 2005 |