Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
CA4780 | CA20172 | U.S. | 2000 | HIV1 | B | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | AZT+IDV | 32 |
2 | D4T+NFV+NVP | 21 |
3 | DDC | 10 |
4 | DDC+DLV+IDV+RTV | 4 |
5 | DDC+IDV | 39 |
6 | DDC+IDV+RTV | 57 |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
D67N, K70R | E6D, D123E, D177E, V179I, G196E, T200I | A267Q |
>CA20172| codons 1-267 PISPIDTVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPV FAIKKKNSTRWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DKEFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPEIII YQYMDDLYVGSDLEIEQHRIKIEELRQHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIVLPEKDSWTVNDIQKLVGKLNWQ |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
V32I, M46I, V82A, L90LM | L63P, A71IT, I93L |
>CA20564| codons 1-99 PQITLWQRPLVTIKIGGQLKEALLDTGADDTILEEMNLPGRWKPKIIGGIGGFIKVRQYD QIPIEICGHKIIGTVLVGPTPANIIGRNLMTQLGCTLNF |
References
Author | Title | Citation |
Gonzales, MJ | Extended spectrum of HIV-1 reverse transcriptase mutations in patients receiving multiple nucleoside analog inhibitors. | AIDS, 2003 |
Rhee, SY | HIV-1 protease and reverse transcriptase mutations: Correlations with antiretroviral therapy in subtype B isolates and implications for drug-resistance surveillance. | J Infect Dis, 2005 |