Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
B0708 | B0708-1 | Uganda | 2008 | HIV1 | B | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | NNRTI+NRTI | 38 |
2 | 3TC+AZT+NVP | 68 |
3 | 3TC+AZT+EFV | NA |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
K65R | K103N, Y181C, M230L | V35T, E40D, K49R, V60I, K122E, D123N, I159V, E169D, I178L, T200A, I202V, Q207E, R211K, K238R, V245K, A272S, L282C, L283I, I293V |
>B0708-1| codons 1-305 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICTDMEKEGKISRIGPENPYNTPI FAIKRKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKNKSVTVLDVGDAYFSVPL DENFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAVFQSSMTKILDPFRKQNPDLVI CQYMDDLYVGSDLEIGQHRAKVEELREHLLKWGFTTPDKKHQKEPPFLWLGYELHPDRWT VQPIKLPEKDSWTVNDIQKLVGKLNWASQIYSGIKVKQLCKCIRGTKALTEVVPLTEEAE LELAE |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
L10I, I13V, G16E, M36I, R41K, L63V |
>B0708-1| codons 1-99 PQITLWQRPIVTVKIEGQLKEALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIKVRQYD QIVIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF |
References
Author | Title | Citation |
Reynolds, SJ | Antiretroviral drug susceptibility among HIV-infected adults failing antiretroviral therapy in Rakai, Uganda. | ARHR, 2012 |