Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
RS11000289 | RS11000289 | Kenya | 2008 | HIV1 | D | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | None | NA |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
I13IV, R41K, R57K, I62V, L63P, I64IV, H69Y, I72IV, V77I |
>RS11000289| codons 5-99 LWQRPLVTVKIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVKQYDQVPV EICGYKAVGTVLIGPTPVNIIGRNLLTQIGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
K11KHNQ, V21VI, V35T, E40ED, K49R, V60I, K102KR, K122E, D123N, S162SAGT, K173S, Q174KR, D177E, I178IM, V179I, T200A, Q207A, R211S, E248EDKN, D250E, A272P, T286A, E291D, V292I, K311KR, E312D, V317VA |
>RS11000289| codons 1-320 PISPIETVPVQLKPGMDGPKIKQWPLTEEKIKALTEICTDMEKEGKISRIGPENPYNTPI FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKRKKSVTVLDVGDAYFSVPL DENFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQTSMTKILEPFRSRNPEMII YQYMDDLYVGSDLEIGQHRAKIEELRAHLLSWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIVLPNKESWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGAKALTDIIPLTEEAE LELAENREILRDPVHGAYYD |
References
Author | Title | Citation |
Hassan, A | Low prevalence of transmitted HIV-1 drug resistance amongst ARV naive adults in a rural HIV clinic in Kenya. | ARHR, 2013 |