Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
RS09000926 | RS09000926 | Kenya | 2008 | HIV1 | C | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | None | NA |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
V11VI | T12S, I15V, L19V, K20R, M36I, N37KR, R41NS, R57K, Q61QH, L63T, H69K, V82I, L89I, I93L |
>RS09000926| codons 5-99 LWQRPLISIKVGGQVREALLDTGADDTVLEEIRLPGSWKPKMIGGIGGFIKVKQYDHITI EICGKKAIGTVLVGPTPINIIGRNILTQLGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
V35T, E36EA, T39E, K43R, S48T, K122E, D123NS, E138A, S162C, K173AV, D177G, T200A, Q207E, V245HQ, P247PA, E248ED, D250DN, A272P, K275Q, V276T, K277KR, T286A, E291D, V292I, I293IV, K311KR, E312EA |
>RS09000926| codons 1-320 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTAICEEMEREGKITKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DESFRKYTAFTIPSINNATPGIRYQYNVLPQGWKGSPAIFQCSMTKILEPFRVQNPGIVI YQYMDDLYVGSDLEIGQHRAKIEELREHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLADKNSWTVNDIQKLVGKLNWASQIYPGIQTRQLCKLLRGAKALTDIVPLTEEAE LELAENREILRAPVHGVYYD |
References
Author | Title | Citation |
Hassan, A | Low prevalence of transmitted HIV-1 drug resistance amongst ARV naive adults in a rural HIV clinic in Kenya. | ARHR, 2013 |