Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
VT-M12 | VT-M12 | Vietnam | 2008 | HIV1 | CRF01_AE | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | None | NA |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
L10V, I13IV, I15IV, G16E, E35D, M36I, R41K, L63C, H69K, L89LM |
>VT-M12| codons 1-99 PQITLWQRPVVTVKVEGQLKEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVRQYD QICIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
V35T, T69TS, K122E, D123N, S162C, K173I, Q174K, D177E, T200TA, Q207A, R211S, K238R | K30KE |
>VT-M12| codons 11-244 KLKPGMDGPKVKQWPLTEEEIKALTEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSSK WRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDENFRKYTAF TIPSINNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILEPFRIKNPEIVIYQYMDDLYVG SDLEIGQHRAKIEELRAHLLSWGFTTPDKKHQKEPPFLWMGYELHPDRWTVQPI |
References
Author | Title | Citation |
Lazaro, E | Molecular characterization of HIV-1 CRF01_AE in Mekong Delta, Vietnam, and impact of T-cell epitope mutations on HLA recognition (ANRS 12159). | PLoS ONE, 2011 |