<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Isolate Data

Patient Isolate Region Year Species Subtype Source Clone Method

Treatment History
Order Regimen Weeks
1 None 52

Protease Sequence
PIMajorDRMs PIMinorDRMs Polys UnusualMuts
    I13V, K14R, K20I, E35K, M36I, N37D, R41K, R57RK, H69K, L89M  
>SK4105-PI| codons 1-99
PQITLWQRPLVTVRIGGQLIEALLDTGADDTVLEKIDLPGKWKPKMIGGIGGFIKVKQYD
QILIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNF

RT Sequence
NRTIMajorDRMs NRTIMinorDRMs NNRTIMajorDRMs NNRTIMinorDRMs Polys UnusualMuts
        P4PST, E6EK, P9PS, K11KR, V35T, E36D, T39L, K122PQ, I142IV, S162A, T165TI, Q174EG, D177E, T200A, Q207E, R211K, V245Q, D250DE, V276VI, K281KR, T286A, E291D, V292I, I293V, P294T  
>SK4105-PI| codons 1-320
PISTIKTVSVRLKPGMDGPKVKQWPLTEEKIKALTDICLEMEKEGKISKIGPENPYNTPV
FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL
DQDFRKYTAFTIPSINNETPGVRYQYNVLPQGWKGSPAIFQASMIKILEPFRKGNPEIVI
YQYMDDLYVGSDLEIGQHRAKIEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT
VQPIQLPEKESWTVNDIQKLVGKLNWASQIYAGIKIKQLCRLLRGAKALTDIVTLTEEAE
LELAENREILKEPVHGVYYD

References
Author Title Citation
Aghokeng, AF High failure rate of the ViroSeq HIV-1 genotyping system for drug resistance testing in Cameroon, a country with broad HIV-1 genetic diversity J Clin Microbiol, 2011