<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Isolate Data

Patient Isolate Region Year Species Subtype Source Clone Method

Treatment History
Order Regimen Weeks
1 None NA

RT Sequence
NRTIMajorDRMs NRTIMinorDRMs NNRTIMajorDRMs NNRTIMinorDRMs Polys UnusualMuts
        V35T, E40D, S48SP, K49R, V60I, V118I, K122E, D123E, I135T, E138A, S162C, E169ED, R172K, Q174QR, D177DE, I178L, T200E, Q207E, R211K, F214L, P243T, V245T, D250E, A272P, K275R, V276T, Q278HN, K281KR, T286A, P294PS, E297K, A304E, K311R Q182S
>SK1002-PI| codons 1-320
PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICTDMEKEGKIPRIGPENPYNTPI
FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSIPL
DEEFRKYTAFTIPSTNNATPGIRYQYNVLPQGWKGSPAIFQCSMTKILDPFKKRNPELVI
YSYMDDLYVGSDLEIGQHREKIEELREHLLKWGLTTPDKKHQKEPPFLWMGYELHPDKWT
VQTITLPEKESWTVNDIQKLVGKLNWASQIYPGIRTKNLCRLLRGAKALTEVISLTKEAE
LELEENREILREPVHGVYYD

Protease Sequence
PIMajorDRMs PIMinorDRMs Polys UnusualMuts
    K14KR, I15V, E35D, M36I, N37ND, R41K, R57RK, I62V, L63A, E65ED  
>SK1002-PI| codons 1-99
PQITLWQRPLVTIRVGGQLKEALLDTGADDTVLEDIDLPGKWKPKMIGGIGGFIKVKQYD
QVAIDICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF

References
Author Title Citation
Aghokeng, AF High failure rate of the ViroSeq HIV-1 genotyping system for drug resistance testing in Cameroon, a country with broad HIV-1 genetic diversity J Clin Microbiol, 2011
Aghokeng, AF Scale-up of antiretroviral treatment in sub-Saharan Africa is accompanied by increasing HIV-1 drug resistance mutations in drug-naive patients. AIDS, 2011