Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
CP076303090 | CP076303090 | Uganda | 2008 | HIV1 | A | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | None | NA |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
L10V, I13V, E35D, M36I, R41K, K43R, R57K, L63A, H69K, L89M |
>CP076303090| codons 1-99 PQITLWQRPVVTVKIGGQLKEALLDTGADDTVLEDINLPGKWRPKMIGGIGGFIKVKQYD QIAIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
E6S, K20R, V21I, V35T, T39A, V60I, K122E, D123N, K173S, T200A, I202V, Q207A, R211S, V245Q, E248D, D250E, A272P, K277R, L282C, L283I, T286A, V292I, I293V, E297K |
>CP076303090| codons 1-307 PISPISTVPVKLKPGMDGPRIKQWPLTEEKIKALTEICAEMEKEGKISKIGPENPYNTPI FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DENFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRSQNPDIVI YQYMDDLYVGSDLEIGQHRAKVEELRAHLLSWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPDKESWTVNDIQKLVGKLNWASQIYPGIKVRQLCKCIRGAKALTEIVPLTKEAE LELAENR |
References
Author | Title | Citation |
Hamers, RL | HIV-1 drug resistance in antiretroviral-naive individuals in sub-Saharan Africa after rollout of antiretroviral therapy: A multicentre observational study. | Lancet, 2011 |