Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
CP076300879 | CP076300879 | Uganda | 2008 | HIV1 | D | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | None | NA |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
I13V, M36I, N37H, R41K, L63Q, I64V, E65D, I72V |
>CP076300879| codons 1-99 PQITLWQRPLVTVKIGGQLKEALLDTGADDTVLEEIHLPGKWKPKMIGGIGGFIKVRQYD QIQVDICGHKAVGTVLVGPTPVNIIGRNLLTQIGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
V35I, E44ED, K49R, V60I, W88S, D121Y, K122E, D123E, I135T, D177E, I178M, E194D, T200I, Q207E, R211K, F214L, V245K, A272S, K277R, L282C, L283I, I293V |
>CP076300879| codons 1-314 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALIEICTEMEKDGKISRIGPENPYNTPI FAIKKKDSTKWRKLVDFRELNKRTQDFSEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL YEEFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPEMVI YQYMDDLYVGSDLDIGQHRIKIEELREHLLKWGLTTPDKKHQKEPPFLWMGYELHPDKWT VQPIKLPEKDSWTVNDIQKLVGKLNWASQIYSGIKVRQLCKCIRGTKALTEVVPLTEEAE LELAENREILKEPV |
References
Author | Title | Citation |
Hamers, RL | HIV-1 drug resistance in antiretroviral-naive individuals in sub-Saharan Africa after rollout of antiretroviral therapy: A multicentre observational study. | Lancet, 2011 |