Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
CP076300841 | CP076300841 | Uganda | 2008 | HIV1 | D | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | None | NA |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
L33I | I13V, K20M, E35D, M36I, R41K, L63Q, I64V, I72V |
>CP076300841| codons 1-99 PQITLWQRPLVTVKIGGQLMEALLDTGADDTVIEDINLPGKWKPKMIGGIGGFIKVRQYD QIQVEICGHKAVGTVLVGPTPVNIIGRNLLTQIGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
V35T, K49R, V60I, D121Y, K122E, I135T, S162A, E169D, D177E, I178V, Q207G, R211K, P243S, V245K, D250E, A272S, L282C, T286A, I293V |
>CP076300841| codons 1-304 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICTEMEKEGKISRIGPENPYNTPI FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL YEDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQASMTKILDPFRKQNPEVVI YQYMDDLYVGSDLEIGQHRTKIEELRGHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQSIKLPEKESWTVNDIQKLVGKLNWASQIYSGIKVKQLCKCLRGAKALTEVVPLTEEAE LELA |
References
Author | Title | Citation |
Hamers, RL | HIV-1 drug resistance in antiretroviral-naive individuals in sub-Saharan Africa after rollout of antiretroviral therapy: A multicentre observational study. | Lancet, 2011 |