Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
CP076303493 | CP076303493 | Nigeria | 2009 | HIV1 | G | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | None | NA |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
I13V, K20I, M36I, R41K, L63P, I64M, C67S, H69K, V82I, L89I |
>CP076303493| codons 1-99 PQITLWQRPLVTVKIGGQLIEALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIKVRQYD QIPMEISGKKAIGTVLVGPTPINIIGRNILTQIGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
V75VL | K20R, V35T, T39E, K43R, V60I, D121Y, K122E, I135V, K173A, Q174KR, D177E, T200A, Q207G, R211K, F214FL, V245Q, E248N, A272P, V276VI, K277KR, Q278H, K281R, T286A, E291D, V292I, I293V, E297A, L301M |
>CP076303493| codons 1-323 PISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALTEICEEMEREGKISKIGPENPYNTPI FAIKKKDSTKWRKLLDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL YEDFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRARNPEIVI YQYMDDLYVGSDLEIGQHRAKIEELRGHLLKWGLTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPNKDSWTVNDIQKLVGKLNWASQIYPGIKIRHLCRLLRGAKALTDIVPLTAEAE MELAENREILKEPVHGVYYDPSK |
References
Author | Title | Citation |
Hamers, RL | HIV-1 drug resistance in antiretroviral-naive individuals in sub-Saharan Africa after rollout of antiretroviral therapy: A multicentre observational study. | Lancet, 2011 |