<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Isolate Data

Patient Isolate Region Year Species Subtype Source Clone Method
CP076304223 CP076304223 Kenya 2008 HIV1 D Plasma None

Treatment History
Order Regimen Weeks
1 None NA

Protease Sequence
PIMajorDRMs PIMinorDRMs Polys UnusualMuts
    L10I, I13V, G17E, M36L, R41K, Q61H, I62V, L63T, I64V, E65D P39P*QS
>CP076304223| codons 1-99
PQITLWQRPIVTVKIGEQLKEALLDTGADDTVLEELNLSGKWKPKMIGGIGGFIKVRQYD
HVTVDICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF

RT Sequence
NRTIMajorDRMs NRTIMinorDRMs NNRTIMajorDRMs NNRTIMinorDRMs Polys UnusualMuts
        V35T, E36ED, E40D, V60I, K122E, D123S, I135T, S162Y, K173S, D177E, I178L, V179I, V189VI, T200A, Q207A, R211S, A272P, K275KR, Q278HN, K281KR, L282C, T286A, V292I  
>CP076304223| codons 1-322
PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTDICTDMEKEGKISKIGPENPYNTPI
FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL
DESFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQYSMTKILEPFRSQNPELII
YQYMDDLYIGSDLEIGQHRAKIEELRAHLLSWGFTTPDKKHQKEPPFLWMGYELHPDKWT
VQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIRVKNLCRCLRGAKALTEIIPLTEEAE
LELAENREILKEPVHGVYYDPS

References
Author Title Citation
Hamers, RL HIV-1 drug resistance in antiretroviral-naive individuals in sub-Saharan Africa after rollout of antiretroviral therapy: A multicentre observational study. Lancet, 2011