<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Isolate Data

Patient Isolate Region Year Species Subtype Source Clone Method
CP076302243 CP076302243 Kenya 2008 HIV1 A Plasma None

Treatment History
Order Regimen Weeks
1 None NA

RT Sequence
NRTIMajorDRMs NRTIMinorDRMs NNRTIMajorDRMs NNRTIMinorDRMs Polys UnusualMuts
        E6D, V35T, E36D, T39TA, V60I, V118I, K122E, D123NS, I135T, Y144YF, Q145X, K173A, Q174K, D177E, V179I, T200A, Q207DE, R211K, F214FL, V245E, D250E, A272S, T286A, E291D, V292I, I293V, P294PT, E312N, S322A  
>CP076302243| codons 1-324
PISPIDTVPVKLKPGMDGPKVKQWPLTEEKIKALTDICAEMEKEGKISKIGPENPYNTPI
FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSIPL
DESFRKYTAFTIPSTNNETPGIRFXYNVLPQGWKGSPAIFQSSMTKILEPFRAKNPEIII
YQYMDDLYVGSDLEIGQHRAKIEELREHLLKWGLTTPDKKHQKEPPFLWMGYELHPDKWT
VQPIELPEKESWTVNDIQKLVGKLNWASQIYSGIKVKQLCKLLRGAKALTDIVTLTEEAE
LELAENREILKNPVHGVYYDPAKD

Protease Sequence
PIMajorDRMs PIMinorDRMs Polys UnusualMuts
    L19Q, E35D, M36I, R41K, R57K, L63P, H69K, K70R, L89M  
>CP076302243| codons 1-99
PQITLWQRPLVTIKIGGQQKEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVKQYD
QIPIEICGKRAIGTVLVGPTPVNIIGRNMLTQIGCTLNF

References
Author Title Citation
Hamers, RL HIV-1 drug resistance in antiretroviral-naive individuals in sub-Saharan Africa after rollout of antiretroviral therapy: A multicentre observational study. Lancet, 2011