Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
CP076301700 | CP076301700 | Kenya | 2008 | HIV1 | A | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | None | NA |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
L10I, I13V, K14R, G16E, E35D, M36I, N37D, R57K, L63A, H69K, L89M |
>CP076301700| codons 1-99 PQITLWQRPIVTVRIEGQLKEALLDTGADDTVLEDIDLPGRWKPKMIGGIGGFIKVKQYD QIAIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
V35T, E36D, V60I, K122E, D123S, I135T, K173S, Q174K, V179I, T200A, Q207A, R211S, I244IV, V245VM, D250DE, A272P, Q278QH, K281KR, T286A, E291D, I293V, P294T |
>CP076301700| codons 1-307 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTDICTEMEKEGKISKIGPENPYNTPI FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DESFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRSKNPDIII YQYMDDLYVGSDLEIGQHRAKIEELRAHLLSWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPVMLPEKESWTVNDIQKLVGKLNWASQIYPGIKVKHLCRLLRGAKALTDVVTLTEEAE LELAENR |
References
Author | Title | Citation |
Hamers, RL | HIV-1 drug resistance in antiretroviral-naive individuals in sub-Saharan Africa after rollout of antiretroviral therapy: A multicentre observational study. | Lancet, 2011 |