Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
CP076301671 | CP076301671 | Kenya | 2008 | HIV1 | A | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | None | NA |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
T12P, I13V, G16E, K20R, E35D, M36I, R41K, D60E, L63T, G68E, H69K, K70R, L89M, T91V, I93L |
>CP076301671| codons 1-99 PQITLWQRPLVPVKIEGQLREALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVRQYE QITIEICEKRAIGTVLVGPTPVNIIGRNMLVQLGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
K11T, G18X, V35T, E36A, T39D, D121Y, K122E, I135T, I142V, S162C, D177E, E203D, Q207A, R211K, K238KR, V245Q, E291D, V292I, I293V, P294T, L295M, E297K, A304E, E312D, S322A, A327V, I329V |
>CP076301671| codons 1-330 PISPIETVPVTLKPGMDXPKVKQWPLTEEKIKALTAICDEMEKEGKISKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL YEDFRKYTAFTIPSTNNETPGVRYQYNVLPQGWKGSPAIFQCSMTKILEPFRKQNPEIVI YQYMDDLYVGSDLEIGQHRTKIDELRAHLLKWGFTTPDKKHQKEPPFLWMGYELHPDRWT VQPIQLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGTKALTDIVTMTKEAE LELEENREILKDPVHGVYYDPAKDLIVEVQ |
References
Author | Title | Citation |
Hamers, RL | HIV-1 drug resistance in antiretroviral-naive individuals in sub-Saharan Africa after rollout of antiretroviral therapy: A multicentre observational study. | Lancet, 2011 |