Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
CP076301586 | CP076301586 | Kenya | 2008 | HIV1 | A | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | None | NA |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
K20R, E35D, M36I, R41K, L63T, H69K, L89M, T91V, I93L |
>CP076301586| codons 17-99 GQLREALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVRQYDQITIEICGKKAIGTVL VGPTPVNIIGRNMLVQLGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
K11KE, V35T, T39R, S48E, D121H, D177E, I178V, G196E, T200A, Q207E, R211K, V245Q, K281R, E291D, V292I, I293V, E297K, A304E, E312N |
>CP076301586| codons 1-329 PISPIETVPVELKPGMDGPKVKQWPLTEEKIKALTEICREMEKEGKIEKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL HKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPEVVI YQYMDDLYVGSDLEIEQHRAKIEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCRLLRGTKALTDIVPLTKEAE LELEENREILKNPVHGVYYDPSKDLIAEI |
References
Author | Title | Citation |
Hamers, RL | HIV-1 drug resistance in antiretroviral-naive individuals in sub-Saharan Africa after rollout of antiretroviral therapy: A multicentre observational study. | Lancet, 2011 |