Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
HJ1958 | HJ1958 | Cameroon | 2007 | HIV1 | CRF02_AG | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | None | NA |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
I13V, K14R, K20R, M36I, R41K, H69K, L89M |
>HJ1958| codons 1-99 PQITLWQRPLVTVRIGGQLREALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIKVRQYD QILIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
V35T, T39A, E40D, K122E, D123S, S162A, K173T, Q174EK, D177E, T200A, Q207E, R211RK, V245Q, T286A, I293V, P294V, E297K, S322A, I326V, G335D |
>HJ1958| codons 1-340 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICADMEKEGKISKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DESFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQASMTKILEPFRTKNPEIVI YQYMDDLYVGSDLEIGQHRAKIEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGAKALTEVVVLTKEAE LELAENREILKEPVHGVYYDPAKDLVAEIQKQGQDQWTYQ |
References
Author | Title | Citation |
Aghokeng, AF | Scale-up of antiretroviral treatment in sub-Saharan Africa is accompanied by increasing HIV-1 drug resistance mutations in drug-naive patients. | AIDS, 2011 |