Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
Pat086 | 11ZA_SAVE1403 | South Africa | 2008 | HIV1 | C | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | AZT+LPV+NNRTI+NRTI+TDF | NA |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
T12S, I15V, L19I, M36L, N37S, L63LP, H69K, K70Q, L89M, I93L |
>11ZA_SAVE1403| codons 1-99 PQITLWQRPLVSIKVGGQIKEALLDTGADDTVLEELSLPGRWKPKMIGGIGGFIKVRQYD QIPIEICGKQAIGTVLVGPTPVNIIGRNMLTQLGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
V35M, E36A, T39E, S48T, A98S, K122E, D123G, K173A, D177E, T200R, Q207T, R211K, V245Q, A272P, K277R |
>11ZA_SAVE1403| codons 1-282 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALMAICEEMEKEGKITKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPSGLKKKKSVTVLDVGDAYFSVPL DEGFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRAQNPEIVI YQYMDDLYVGSDLEIGQHRRKIEELRTHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKL |
References
Author | Title | Citation |
El-Khatib, Z | Viremia and drug resistance among HIV-1 patients on antiretroviral treatment: a cross-sectional study in Soweto, South Africa. | AIDS, 2010 |