Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
Pat078 | 11ZA_SAVE1172 | South Africa | 2008 | HIV1 | C | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | ABC+DDI+LPV+NNRTI+NRTI | NA |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
L10V, I15V, L19V, K20R, M36I, R41K, H69K, L89M, I93L |
>11ZA_SAVE1172| codons 1-99 PQITLWQRPVVTIKVGGQVREALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIKVRQYD QILIEICGKKAIGTVLVGPTPVNIIGRNMLTQLGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
V35T, E36A, T39E, S48T, K122E, K173T, D177DE, I178IM, T200A, Q207E, R211K, V245Q, A272P |
>11ZA_SAVE1172| codons 1-282 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTAICEEMEKEGKITKIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRTQNPEMVI YQYMDDLYVGSDLEIGQHRAKIEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKL |
References
Author | Title | Citation |
El-Khatib, Z | Viremia and drug resistance among HIV-1 patients on antiretroviral treatment: a cross-sectional study in Soweto, South Africa. | AIDS, 2010 |