<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Isolate Data

Patient Isolate Region Year Species Subtype Source Clone Method

Treatment History
Order Regimen Weeks
1 Unknown NA

Integrase Sequence
INIMajorDRMs INIMinorDRMs Polys UnusualMuts
    K14R, A21T, I60M, I72V, L74I, T112V, I113V, T124A, T125A, V126F, G134N, I135V, K136Q, K173R, V176L, V201I, L234I S283G
>CY107| codons 1-288
FLDGIDKAQEEHERYHSNWRTMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGM
WQLDCTHLEGKVIIVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKVVHTDNGSN
FTSAAFKAACWWANVQQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLRTALQMAV
FIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQITKIQNFRVYYRDSRDPIWKGPAK
LLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVAGRQDED

Protease Sequence
PIMajorDRMs PIMinorDRMs Polys UnusualMuts
    L19I, N37C, L63A, E65D  
>CY107| codons 1-99
PQITLWQRPLVTIKIGGQIKEALLDTGADDTVLEEMCLPGRWKPKMIGGIGGFIKVRQYD
QIAIDICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF

RT Sequence
NRTIMajorDRMs NRTIMinorDRMs NNRTIMajorDRMs NNRTIMinorDRMs Polys UnusualMuts
    K103N K238T S162C, E169D, D177G, T200A, R211K, A272P, K281R, T286A, E291D, V292I, I293V, P294T, G335D, P345S, M357K, G359S, T369A, A371V, I375V, T377M, K388N, A400T, T403R, E404D, K431T, E432D, V435I, D471E, Q480H, L491S, E516D, S519N, Q524M, K527G, E529D, A534S, I556V, V559I  
>CY107| codons 1-560
PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPV
FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKNKSVTVLDVGDAYFSVPL
DKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILDPFRKQNPGIVI
YQYMDDLYVGSDLEIGQHRAKIEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDTWT
VQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCRLLRGAKALTDIVTLTEEAE
LELAENREILKEPVHGVYYDPSKDLIAEIQKQGQDQWTYQIYQESFKNLKTGKYARKRSA
HTNDVKQLAEVVQKVAMESIVIWGKTPNFKLPIQKETWETWWRDYWQATWIPEWEFVNTP
PLVKLWYQLETDPIIGAETFYVDGAANRETKLGKAGYVTDRGRQKVVSLTETTNQKTELH
AIHLALQDSGSEVNIVTDSQYALGIIQAQPDKSESDLVNQIIEMLIGKDKVYLSWVPAHK
GIGGNEQVDKLVSAGVRKIL

References
Author Title Citation
Kousiappa, I Near full-length genetic analysis of HIV sequences derived from Cyprus: evidence of a highly polyphyletic and evolving infection. ARHR, 2009