Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| T12A, I13V, L19I, K20I, M36I, N37S, R41K, I64M, C67GS, H69K, V82I, L89M |
| >J11451| codons 1-99 PQITLWQRPLVAVKIGGQIIEALLDTGADDTVLEEISLPGKWKPKMIGGIGGFIKVRQYD QILMEISGKKAIGTVLVGPTPINIIGRNMLTQIGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| K22R, V35T, T39N, V60I, K122E, D123N, I135L, K173A, Q174K, T200A, Q207E, R211RK, V245K, K249KQ, A272P, K281R, E291D, V292I, I293V, E312N, D324E, I329V, G335D, F346HY, M357R, R358G, G359S, A376S, T386I, K390R, A400T, E404D, E432D, V435A, K454R, D471E, Q480H, L491S, L517I, S519N, A534S, A554KR |
| >J11451| codons 1-560 PISPIETVPVKLKPGMDGPKVRQWPLTEEKIKALTEICNEMEKEGKISKIGPENPYNTPI FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DENFRKYTAFTIPSLNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRAKNPDIVI YQYMDDLYVGSDLEIGQHRAKIEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIKLPEQDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCRLLRGTKALTDIVPLTEEAE LELAENREILKNPVHGVYYDPSKELIAEVQKQGQDQWTYQIYQEPYKNLKTGKYARRGSA HTNDVKQLTEAVQKISTESIVIWGKIPKFRLPIQKETWETWWTDYWQATWIPEWEFVNTP PLVKLWYQLEKDPIAGAETFYVDGAANRETKLGRAGYVTDRGRQKVVSLTETTNQKTELH AIHLALQDSGSEVNIVTDSQYALGIIQAQPDKSESEIVNQIIEQLIKKEKVYLSWVPAHK GIGGNEQVDKLVSRGIRKVL |
Integrase Sequence
| INIMajorDRMs | INIMinorDRMs | Polys | UnusualMuts |
| K14R, S39C, L101I, T112V, S119P, T122I, T124A, T125A, D167E, V201I, T206S, T218I, L234I | S283G |
| >J11451| codons 1-288 FLDGIDKAQEEHERYHSNWRAMASDFNLPPVVAKEIVACCDKCQLKGEAMHGQVDCSPGI WQLDCTHLEGKIILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVKVIHTDNGPN FISAAVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVREQAEHLKTAVQMAV FIHNFKRKGGIGGYSAGERIIDIIASDIQTKELQKQIIKIQNFRVYYRDSRDPIWKGPAK LLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVAGRQDED |
References
| Author | Title | Citation |
| Yamaguchi, J | Identification of new CRF43_02G and CRF25_cpx in Saudi Arabia based on full genome sequence analysis of six HIV type 1 isolates. | ARHR, 2008 |