Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
GQ323 | 08GQ323 | Equatorial Guinea | 2008 | HIV1 | A | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | None | NA |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
P1PS, L10I, I13V, G16E, K20R, E35D, M36I, R41K, K45R, I62V, L63T, E65D, H69Q, L89M |
>08GQ323| codons 1-99 SQITLWQRPIVTVKIEGQLREALLDTGADDTVLEDINLPGKWKPRMIGGIGGFIKVRQYD QVTIDICGQKAIGTVLVGPTPVNIIGRNMLTQIGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
V35T, T39D, K49R, V60I, K122P, T139K, I142V, K173S, D177E, T200A, Q207E, R211K, V245Q, K249Q, S251N, A272P, L279M, T286A, E291D, V292I, I293V, E297R, A304E, E308Q, K311R, E312D, V317VAIT, G335D, R356K, M357R, R358K, G359S, T369A, A371V, I375V, A376V, T377L, K390R, E399D, A400T, T403M, E404D, V435I |
>08GQ323| codons 1-440 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICDEMEKEGKISRIGPENPYNTPI FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DPDFRKYTAFTIPSINNEKPGVRYQYNVLPQGWKGSPAIFQSSMTKILEPFRSQNPEIVI YQYMDDLYVGSDLEIGQHRAKIEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPEQDNWTVNDIQKLVGKLNWASQIYPGIKVKQMCKLLRGAKALTDIVPLTREAE LELEENRQILRDPVHGTYYDPSKDLIAEIQKQGQDQWTYQIYQEPFKNLKTGKYAKRKSA HTNDVKQLAEVVQKVVLESIVIWGKTPKFRLPIQKETWDTWWMDYWQATWIPEWEFVNTP PLVKLWYQLEKEPIIGAETF |
References
Author | Title | Citation |
Djoko, CF | HIV type 1 pol gene diversity and genotypic antiretroviral drug resistance mutations in Malabo, Equatorial Guinea. | ARHR, 2010 |