Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| BA-040 | 06CM-BA-040 | Cameroon | 2006 | HIV1 | CRF25_cpx | Plasma | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | None | NA |
Integrase Sequence
| INIMajorDRMs | INIMinorDRMs | Polys | UnusualMuts |
| L68V | E11D, K14R, V31I, M50L, I72IV, L101I, T112V, S119P, T122I, T124A, T125A, G134D, G163V, D167E, V201I, T206S, I208M, T218I, L234I, D256E | S283G |
| >06CM-BA-040| codons 1-288 FLDGIDKAQEDHERYHSNWRAMASDFNLPPIVAKEIVASCDKCQLKGEALHGQVDCSPGI WQLDCTHVEGKVILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVKVIHTDNGPN FISAAVKAACWWADIKQEFGIPYNPQSQGVVESMNKELKKIIVQVREQAEHLKTAVQMAV FIHNFKRKGGIGGYSAGERIIDIIASDMQTKELQKQIIKIQNFRVYYRDSRDPIWKGPAK LLWKGEGAVVIQDNSEIKVVPRRKAKIIRDYGKQMAGDDCVAGRQDED |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| I13V, L19IM, K20I, E35Q, M36I, N37D, R41K, C67M, H69K, V82I, L89M |
| >06CM-BA-040| codons 1-99 PQITLWQRPLVTVKIGGQMIEALLDTGADDTVLEQIDLPGKWKPKMIGGIGGFIKVRQYD QILIEIMGKKAIGTVLVGPTPINIIGRNMLTQIGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| V21I, V35T, T39N, V60I, K104R, D123E, I135T, K173A, D177E, T200A, R211K, V245K, D250E, A272S, K281R, E291D, V292I, I293V, E297A, K311R, E312N, L325I, G335D, F346H, R356K, M357R, R358G, G359S, A376S, T386V, K390R, A400T, E432D, V435I, R461K, D471E, Q480H, H483Y, L491T, L517I, S519N, A534S, A554N, K558R | R172RT |
| >06CM-BA-040| codons 1-560 PISPIETVPVKLKPGMDGPKIKQWPLTEEKIKALTEICNEMEKEGKISKIGPENPYNTPI FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKRSVTVLDVGDAYFSVPL DKEFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFTAQNPEIVI YQYMDDLYVGSDLEIGQHRAKIEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIKLPEKESWTVNDIQKLVGKLNWASQIYSGIKVKQLCRLLRGTKALTDIVPLTAEAE LELAENREILRNPVHGVYYDPSKDIIAEIQKQGQDQWTYQIYQEPHKNLKTGKYAKRGSA HTNDVKQLTEAVQKISTESIVIWGKVPKFRLPIQKETWETWWTEYWQATWIPEWEFVNTP PLVKLWYQLEKDPIIGAETFYVDGAANRETKLGKAGYVTDKGRQKVVSLTETTNQKTELH AIYLALQDSGTEVNIVTDSQYALGIIQAQPDKSESEIVNQIIEQLIKKEKVYLSWVPAHK GIGGNEQVDKLVSNGIRRVL |
References
| Author | Title | Citation |
| Luk, KC | Near full-length genome characterization of an HIV type 1 CRF25_cpx strain from Cameroon. | ARHR, 2008 |