Isolate Data
| Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
| 812 | 07BR_FPS812 | Brazil | 2007 | HIV1 | F | PBMC | None |
Treatment History
| Order | Regimen | Weeks |
| 1 | PI | RTI | NA |
Integrase Sequence
| INIMajorDRMs | INIMinorDRMs | Polys | UnusualMuts |
| S17N, V32I, I72V, I84L, L101I, S119P, T124A, T125A, G134N, K136Q, V201I, T206S, I208M, K211R, T218I, L234V, D256E, V259I | S283G |
| >07BR_FPS812| codons 1-288 FLDGIDKAQEEHEKYHNNWRAMASDFNLPPVIAKEIVASCDKCQLKGEAMHGQVDCSPGI WQLDCTHLEGKVILVAVHVASGYLEAEVIPAETGQETAYFILKLAGRWPVKTIHTDNGPN FTSAAVKAACWWANIQQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAV FIHNFKRKGGIGGYSAGERIIDIIASDMQTRELQKQIIKIQNFRVYYRDSRDPVWKGPAK LLWKGEGAVVIQDNSEIKIVPRRKAKIIRDYGKQMAGDDCVAGRQDED |
Protease Sequence
| PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
| I15V, K20R, E35D, M36I, R41K, R57K, Q61N, I72T, L89I |
| >07BR_FPS812| codons 1-99 PQITLWQRPLVTIKVGGQLREALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVKQYD NILIEICGHKATGTVLVGPTPVNIIGRNILTQIGCTLNF |
RT Sequence
| NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
| M184V | N348I | E6D, K20R, V35T, K49R, I135T, S162C, E169A, K173A, Q174K, I178L, T200A, Q207E, R211A, V245Q, E248D, A272P, L283I, E291D, V292I, I293V, P294S, E297A, Q334L, R356K, G359T, T377R, T386I, K390R, Q394L, A400T, K431T, V435A, A446S, L452K, V466A, D471E, T477A, H483Q, L484I, L491P, S519N, A534S, V559I |
| >07BR_FPS812| codons 1-560 PISPIDTVPVKLKPGMDGPRVKQWPLTEEKIKALTEICTEMEKEGKISRIGPENPYNTPV FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPL DKDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILAPFRAKNPDLVI YQYVDDLYVGSDLEIGQHRAKIEELREHLLAWGFTTPDKKHQKEPPFLWMGYELHPDKWT VQPIQLPDKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLIRGTKALTDIVSLTAEAE LELAENREILKEPVHGVYYDPSKDLIAEIQKQGLGQWTYQIYQEPFKILKTGKYAKMRTA HTNDVKQLTEAVQKIARESIVIWGKIPKFRLPILKETWETWWTEYWQATWIPEWEFVNTP PLVKLWYQLETEPIAGAETFYVDGASNRETKKGKAGYVTDRGRQKAVSLTETTNQKAELQ AIQIALQDSGPEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKEKVYLSWVPAHK GIGGNEQVDKLVSAGIRKIL |
References
| Author | Title | Citation |
| Sanabani, SS | Characterization and frequency of a newly identified HIV-1 BF1 intersubtype circulating recombinant form in Sao Paulo, Brazil. | Virology J, 2010 |