Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
188418 | 188418 | Argentina | 2004 | HIV1 | C | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | NNRTI|NRTI|PI | NA |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
I15V, G16A, N37R, R41N, H69K, L89M, I93L |
>188418| codons 1-99 PQITLWQRPLVTIKVAGQLKEALLDTGADDTVLEEMRLPGNWKPKMIGGIGGFIKVRQYD QILIEICGKKAIGTVLVGPTPVNIIGRNMLTQLGCTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
D67DGNS, K70R | K219Q, N348NI | K103N, G190A | V21VF, V35T, T39D, E40EG, S48T, V60I, K122E, D123S, I135T, I142IV, S162A, E169D, T200R, E203D, R211K, V245Q, A272P, E291D, V292I, I293V, I326V, G335D, F346G, R356K, G359T, K366R, T377L | P19S |
>188418| codons 1-386 PISPIETVPVKLKPGMDGSKFKQWPLTEEKIKALTEICDGMEKEGKITKIGPENPYNTPI FAIKKKSSTRWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKNKSVTVLDVGDAYFSVPL DESFRKYTAFTIPSTNNETPGVRYQYNVLPQGWKGSPAIFQASMTKILDPFRKQNPDIVI YQYMDDLYVASDLEIGQHRRKIDELRQHLLKWGFTTPDQKHQKEPPFLWMGYELHPDKWT VQPIQLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGTKALTDIVPLTEEAE LELAENREILKEPVHGVYYDPSKDLVAEIQKQGQDQWTYQIYQEPGKILKTGKYAKMRTA HTNDVRQLTEAVQKIALESIVIWGKT |
References
Author | Title | Citation |
Jones, LR | In-depth analysis of the origins of HIV type 1 subtype C in South America. | ARHR, 2009 |