Isolate Data
Patient | Isolate | Region | Year | Species | Subtype | Source | Clone Method |
CA4501 | CA16075 | U.S. | 2000 | HIV1 | B | Plasma | None |
Treatment History
Order | Regimen | Weeks |
1 | AZT | 17 |
2 | AZT+ DDC | 74 |
3 | AZT+ 3TC | 21 |
4 | 3TC+ AZT+ RTV | 13 |
5 | 3TC+ AZT+ IDV | 43 |
6 | DDI+ DLV+ NFV | 148 |
Protease Sequence
PIMajorDRMs | PIMinorDRMs | Polys | UnusualMuts |
M46I, I54V, V82A, L90M | L10I, K20KR, E35D, M36MI, N37ND, R41K, I62V, L63P, T74S, I93L, C95F |
>CA16075| codons 1-99 PQITLWQRPIVTIKIGGQLREALLDTGADDTVLEDIDLPGKWKPKIIGGIGGFVKVRQYD QVPIEICGHKAIGSVLVGPTPANIIGRNLMTQLGFTLNF |
RT Sequence
NRTIMajorDRMs | NRTIMinorDRMs | NNRTIMajorDRMs | NNRTIMinorDRMs | Polys | UnusualMuts |
M41L, D67N, K70G, L74V, T215F | K219Q | K103N, Y181C | K122E, I135T, I202V, A272P, K277R, I293ILV |
>CA15824| codons 1-298 PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTELEKEGKISKIGPENPYNTPV FAIKKKNSTGWRKVVDFRELNKRTQDFWEVQLGIPHPAGLKKNKSVTVLDVGDAYFSVPL DEDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVI CQYMDDLYVGSDLEIGQHRTKVEELRQHLLRWGFFTPDQKHQKEPPFLWMGYELHPDKWT VQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVVPLTEE |
References
Author | Title | Citation |
Rhee, SY | HIV-1 protease and reverse transcriptase mutations: Correlations with antiretroviral therapy in subtype B isolates and implications for drug-resistance surveillance. | J Infect Dis, 2005 |
Rhee, SY | Predictive value of HIV-1 genotypic resistance test interpretation algorithms. | J Infect Dis, 2009 |